Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819471.1_cds_XP_016500072.1_13933
CDS Infomation

[gene=LOC107818553] [db_xref=GeneID:107818553] [protein=stomatin-like protein 2, mitochondrial] [protein_id=XP_016500072.1] [location=join(52801..53006,53090..53333,53431..53580,60918..60975,61068..61160,61504..61602,61988..62079,62370..62429,62528..62791)] [gbkey=CDS]
Sequence

ATGAACGCGGCGAGGTCGAACTCCCTCAGCAAGCTTCGGCTGCTGAACCACATACTTCAA
TCGCCGACCACCAGAGCAGTCTCCACTCTCTCTTCCCCGATTCTAAAGCAGTCCTCTCTT
ATATCCAATAAGCTCCCGCCACGCCAACTCTCCCCTTTCTTCACCTCCGTCCGCCATTTC
CGTAACGCTCGCGACCCCAGCGTGAGATATGAAATCCCGCCGCCAGTTAATTGGGGAGTA
CGAATTGTGCCTGAGAAAAAGGCTTATGTTGTTGAGCGGTTTGGGAAATATGCGAAGACG
TTGACTCCTGGAATTCACGTATTGATCCCTTTCGTGGATAAAATTGCTTATGTGCATTCG
CTAAAGGAAGAGGCAATTCCTATACCGGACCAATCTGCCATTACCAAGGACAATGTCAGC
ATTTTAATTGATGGTGTTCTCTACGTCAAGATTGTGGACCCTAAATTGGCGTCGTATGGG
GTTGAGAATCCACTGTATGCGGTAATTCAGCTAGCACAGACAACTATGCGAAGTGAGCTT
GGTAAGATCACCCTGGACAAGACCTTTGAGGAAAGGGACACTTTGAATGAAAAGATAGTG
ATGGCTATTAATGATGCTGCACAAGATTGGGGCTTGAAATGTCTTCGATATGAAATAAGG
GATATATCTCCTCCTCGTGGGGTTAGAGCGGCTATGGAGATGCAGGCTGAAGCAGAACGA
AAAAAAAGGGCTCAAGTTCTGGAGTCAGAAGGAGAAAGGCAGGCAAATATTAACATTGCA
GATGGAAGGAAGAGTTCAGTGATCCTTGCCTCAGAAGCTGCAAAAATGGACCAGGTCAAC
AGAGCGCTAGGTGAAGCGGAAGCAATCCTCGCTAGGGCACAAGCTACAGCAAAAGGGATA
GCAATGGTGTCACAAACCCTTAAAGAGCATGGTGGTGCAGAGGCAGCAAGTTTGAGAATT
GCGGAGCAGTATATCCAAGCATTCAGTAATATTGCAAAGGAGGGCACAACGCTGTTACTT
CCTACGAGTGCTGCTGATCCTGCTAGCATGATGGCTCAAGCTCTTGGCATATATAAAAAC
GTAGTGGGCAAGAATTCTGGAACTGAACTTCCTGGGATCTCTCAATCTAAGTTGACCAGA
ACCACCAGGCAGAGTGATTCATCTGCAGCCACTGGCGATGACAGCTCTCTTACTGCAAAA
TCTGCTGATGAGGATCATCTGGGTGACCCTGTTTTCTCTTTGCAAAGCCACAAAAAGGAT
GATTGA

Peptide Sequence

PEP ID

XP_016500072.1
PEP Infomation

PREDICTED: stomatin-like protein 2, mitochondrial [Nicotiana tabacum]
Sequence

MNAARSNSLSKLRLLNHILQSPTTRAVSTLSSPILKQSSLISNKLPPRQLSPFFTSVRHF
RNARDPSVRYEIPPPVNWGVRIVPEKKAYVVERFGKYAKTLTPGIHVLIPFVDKIAYVHS
LKEEAIPIPDQSAITKDNVSILIDGVLYVKIVDPKLASYGVENPLYAVIQLAQTTMRSEL
GKITLDKTFEERDTLNEKIVMAINDAAQDWGLKCLRYEIRDISPPRGVRAAMEMQAEAER
KKRAQVLESEGERQANINIADGRKSSVILASEAAKMDQVNRALGEAEAILARAQATAKGI
AMVSQTLKEHGGAEAASLRIAEQYIQAFSNIAKEGTTLLLPTSAADPASMMAQALGIYKN
VVGKNSGTELPGISQSKLTRTTRQSDSSAATGDDSSLTAKSADEDHLGDPVFSLQSHKKD
D

Transcript Sequence

Gene sequence data has not been registered.